Publications: Journals

2021

290. A. Ganguli, A. Mostafa, J. Berger, J. Lim, E. Araud, J. Baek, S. A. Stewart de Ramirez, A. Baltaji, K. Roth, M. Aamir, S. Aedma, M. Mady, P. Mahajan, S. Sathe, M. Johnson, K. White, J. Kumar, E. Valera, R. Bashir, "Reverse Transcription Loop-Mediated Isothermal Amplification Assay for Ultrasensitive Detection of SARS-CoV-2 in Saliva and Viral Trnsport Medium Clinical Samples", Anal. Chem., Online Published, (2021); doi:10.1021/acs.analchem.0c05170.

289. E. Valera, A. Jankelow, J. Lim, V. Kindratenko, A. Ganguli, K. White, J. Kumar, R. Bashir , "COVID-19 Point-of-Care Diagnostics: Present and Future", ACS Nano, 15, 7899-7906, (2021); doi:10.1021/acsnano1c02981.

288. H. Zhao, Y. Kim, H. Wang, X. Ning, C. Xu. J. Suh, M. Han, G. J. Pagan-Diaz, W. Lu, H. Li, W. Bai, O. Aydin, Y. Park, J. Wang, Y. Yao, Y. He, M. T. A. Saif, Y. Huang, R. Bashir, J. A. Rogers, "Compliant 3D frameworks instrumented with strain sensors for characterization of millimeter-scale engineered muscle tissues", PNAS, 118, e2100077118, (2021); doi:10.1073/pnas.2100077118.

287. A. Ganguli, A. Mostafa, C. Saavedra, Y. Kim, P. Le, V. Faramarzi, R. W. Feathers, J. Berger, K. P. Ramos-Cruz, O. Adeniba, G. J. Pagan-Diaz, J. Drnevich, C. L. Wright, A. G. Hernandez, W. Lin, A. M. Smith, F. Kosari, G. Vasmatzis, P. Z. Anastasiadis, R. Bashir , "Three-dimensional microscale hanging drop arrays with geometric control for drug screening and live tissue imaging", Sci. Adv., 7, eabc1323, (2021); doi:10.1126/sciadv.abc1323.

286. I. Taneja, G. L. Damhorst, C. Lopez-Espina, S. D. Zhao, R. Zhu, S. Khan, K. White, J. Kumar, A. Vincent, L. Yeh, S. Majdizadeh, W. Weir, S. Isbell, J. Skinner, M. Devanand, S. Azharuddin, R. Meenakshisundaram, R. Upadhyay, A. Syed, T. Bauman, J. Devito, C. Heinzmann, G. Podolej, L. Shen, S. S. Timilsina, L. Quinlan, S. Manafirasi, E. Valera, B. Reddy, R. Bashir, "Diagnostic and Prognostic Capabilities of a Biomarker and EMR-based Machine Learning Algorithm for Sepsis", Clin. Transl. Sci., Online Published (2021); doi:10.1111/cts.13030.

285. E. A. Solomon, A. M. Rooney, A. M. Rodriguez, S. Micheva-Viteva, R. Bashir, R. Iyer, J. F. Harris , "Neuromuscular Junction Model Optimized for Electrical Platforms", Tissue Eng C, Online Published (2021); doi:10.1089/ten.TEC.2020.0292.

284. S. Chen, J. Son, S. Huang, K. Watanabe, T. Taniguchi, R. Bashir, A. M. van der Zande, W. P. King, "Tip-Based Cleaning and Smoothing Improves Performance in Monolayer MoS2 Devices", ACS Omega, 6, 4013 (2021); doi:10.1021/acsomega.0c05934.

283. J. Wang, X. Zhang, J. Park, I. Park, E. Kilicarslan, Y. Kim, Z. Dou, R. Bashir, M. Gazzola, "Computationally Assisted Design and Selection of Maneuverable Biological Walking Machines", Adv. Intell. Syst. 3, 2000237 (2021); doi:10.1002/aisy.202000237.

2020

282. W. P. King, J. Amos, M. Azer, D. Baker, R. Bashir, C. Best, E. Bethke, S. A. Boppart, E. Bralts, R. M. Corey, R. Diekus, G. Durack, S. Elbel, G. Elliott, J. Fava, N. Goldenfeld, M. H. Goldstein, C. Hayes, N. Herndon, S. Jamison, B. Johnson, H. Johnson, M. Johnson, J. Kolaczynsk, T. Lee, S. Maslov, D. J. McGregor, D. Milner, R. Moller, J. Mosley, A. Musser, M. Newberger, D. Null, L. O'Bryan, M. Oelze, J. O'Leary, A. Pagano, M. Philpott, B. Pianfetti, A. Pille, L. Pizzuto, B. Ricconi, M. Rubessa, S. Rylowicz, C. Shipley, A. C. Singer, B. Stewart, R. Switzky, S. Tawfick, M. Wheeler, K. White, E. M. Widloski, E. Wood, C. Wood, A. R. Woolbridge, "Emergency ventilator for COVID-19", Plos One, 15, e0244963 (2020); doi:10.1371/journal.pone.0244963.

281. W. C. Ballance, V. Karthikeyan, I. Oh, E. C. Qin, Y. Seo, T. Spearman-White, R. Bashir, Y. Hu, H. Phillips, and H. Kong, "Preoperative vascular surgery model using a single polymer tough hydrogel with controllable elastic moduli", Soft Matter 16, 8057 (2020); doi:10.1039/d0sm00981d.

280. A. Ganguli, A. Mostafa, J. Berger, M. Y. Aydin, F. Sun, S. A. S. de Ramirez, E. Valera, B. T. Cunningham, W. P. King, and R. Bashir, "Rapid isothermal amplification and portable detection system for SARS-CoV-2", PNAS, 117, 22727 (2020); doi:10.1073/pnas.2014739117.

279. I. Park, J. W. Lim, S. H. Kim, S. Choi, K. H. Ko, M. G. Son, W.-J. Chang, Y. R. Yoon, S. Yang, J. Key, Y. S. Kim, K. Eom, R. Bashir, S. Y. Lee, and S. W. Lee, "Variable Membrane Dielectric Polarization Characteristic in Individual Live Cells", J. Phys. Chem. Lett. 11, 7197 (2020); doi:10.1021/acs.jpclett.0c01427.

278. O. O. Adeniba, E. A. Corbin, A. Ganguli, Y. Kim, and R. Bashir, "Simultaneous time-varying viscosity, elasticity, and mass measurements of single adherent cancer cells across cell cycle", Sci. Rep. 10, 12803 (2020); doi:10.1038/s41598-020-69638-z.

277. G. J. Pagan-Diaz, J. Drnevich, K. P. Ramos-Cruz, R. Sam, P. Sengupta, and R. Bashir, "Modulating electrophysiology of motor neural networks via optogenetic stimulation during neurogeneisis and synapogenesis", Sci. Rep. 10, 12460 (2020); doi:10.1038/s41598-020-68988-y.

276. P. Snapp, M. Heiranian, M. T Hwang, R. Bashir, N. R. Aluru, and S.W. Nam, "Current understanding and emerging applications of 3D crumpling mediated 2D material-liquid interactions", Curr. Opin. Solid State Mater. Sci. 24, 100836 (2020); doi:10.1016/j.cossms.2020.100836.

275. T. W. Cowell, E. Valera, A. Jankelow, J. Park, A. W. Schrader, R. Ding, J. Berger, R. Bashir, and H.-S. Han, "Rapid, multiplexed detection of biomolecules using electrically distinct hydrogel beads", Lab Chip, 20, 2274 (2020); doi:10.1039/d0lc00243g.

274. A. Ganguli, V. Faramarzi, A. Mostafa, M. T. Hwang, S. You, and R. Bashir, "High Sensitivity Graphene Field Effect Transistor-Based Detection of DNA Amplification", Adv. Funct. Mater. 30, 2001031 (2020); doi:10.1002\adfm.202001031.

273. A. Ganguli, A. Mostafa, J. Berger, M. Aydin, F. Sun, E. Valera, B. T. Cunningham, W. P. King, and R. Bashir, "Rapid Isothermal Amplification and Portable Detection System for SARS-CoV-2", bioRxiv, doi: https://doi.org/10.1101/2020.05.21.108381.

272. J. Berger, E. Valera, A. Jankelow, C. Garcia, M. Akhand, J. Heredia, T. Ghonge, C. Liu, V. Font-Bartumeus, G. Oshana, J. Tiao, and R. Bashir, "Simultaneous electrical detection of IL-6 and PCT using a microfluidic biochip platform", Biomedical Microdevices 22, 36 (2020) ; doi:10.1007/s10544-020-00492-6.

271. C. D. Kaufman, S. C. Liu, C. Cvetkovic, C. A. Lee, G. Naseri Kouzehgarani, R. Gillette, R. Bashir, and M. U. Gillette, "Emergence of functional neuromuscular junctions in an engineered, multicellular spinal cord-muscle bioactuator", APL Bioeng. 4, 026104 (2020) ; doi:10.1063/1.512440.

270. F. Sun, A. Ganguli, J. Nguyen, R. Brisbin, K. Shanmugam, D. L. Hirschberg, M. B. Wheeler, R. Bashir, D. M. Nash, and B. T. Cunningham, "Smartphone-Based Multiplex 30-minute Nucleic Acid Test of Live Virus from Nasal Swab Extract", Lab Chip. 20, 1621 (2020) ; doi:10.1039/D0LC00304B.

269. I. Srivastava, M. S. Khan, K. Dighe, M. Alafeef, Z. Wang, T. Banerjee, T. Ghonge, L. M. Grove, R. Bashir, and D. Pan, "On-Chip Electrical Monitoring of Real-Time "Soft" and "Hard" Protein Corona Formation on Carbon Nanoparticles", Small Methods. 4, 2000099 (2020) ; doi:10.1002/smtd.202000099.

268. M. T. Hwang, M. Heiranian, Y. Kim, S. You, J. Leem, A. Taqieddin, V. Faramarzi, Y. Jing, I. Park, A. M. van der Zande, S. Nam, N. R. Aluru, and R. Bashir, "Ultrasensitive detection of nucleic acids using deformed graphene channel field effect biosensors", Nature Comm. 11, 1543 (2020) ; doi:10.1038/s41467-020-15330-9.

267. O. Aydin, A. P. Passaro, M. Elhebeary, G. J. Pagan-Diaz, A. Fan, S. Nuethong, R. Bashir, S. L. Stice, and M. T. A. Saif, "Development of 3D neuromuscular bioactuaotrs", APL Bioeng. 4, 016107 (2020); doi:10.1063/1.5134477.

266. Y. Kim, G. Pagan-Diaz, L. Gapinske, Y. Kim, J. Suh, E. Solomon, J. F. Harris, S.W. Nam, and R. Bashir, "Integration of Graphene Electrodes with 3D Skeletal Muscle Tissue Models", Adv. Healthcare Mater. 9, 1901137 (2020); doi:10.1002/adhm.201901137.

265. F. Liu, J. Mao, W. Kong, Q. Hua, Y. Feng, R. Bashir, T. Lu, "Interaction Variability Shapes Succession of Synthetic Microbial Ecosystems", Nature Comm. 11, 309 (2020); doi:10.1038/s41467-019-13986-6.

2019

264. T. J. Kwak, I. Hossen, R. Bashir, W. -J. Chang, C. H. Lee, "Localized Dielectric Loss Heating in Dielectrohoresis Devices", Sci Rep, 9, 18977 (2019); doi:10.1038/s41598-019-55031-y.

263. G. J. Pagan-Diaz, K. P. Ramos-Cruz, R. Sam, M. E. Kandel, O. Aydin, M. T. A. Saif, G. Popescu, R. Bashir, "Engineering geometrical 3-dimensional untethered in vitro neural tissue mimic", PNAS 116, 25932 (2019); doi.org/10.1073/pnas.1916138116.

262. J. Makela, R. Bashir, L. Hahn, "Engineering Education Reinvented", Issues in Science and Technology, 35, 3 (2019).

261. O. Aydin, X. Zhang, S. Nuethong, G. J. Pagan-Diaz, R. Bashir, M. Gazzola, M. T. A. Saif, "Neuromuscular actuation of biohybrid motile bots", PNAS 116, 19841 (2019); doi.org/DOI:10.1073/pnas.1907051116.

260. M. Sample, M. Boulicault, C. Allen, R. Bashir, I. Hyun, M. Levis, C. Lowental, D. Mertz, N. Montserrat, M. J. Palmer, K. Saha, J. Zartman, "Multi-cellular engineered living systems: building a community around responsible research on emergence", Biofabrication, 11, 043001 (2019); doi.org/DOI:10.1088/1758-5090/ab268c.

259. S. Chen, S.P. Kim, W. Chen, J. Yuan, R. Bashir, J. Lou, A. M. van der Zande, W. P. King, "Monolayer MoS2 Nanoribbon Transistors Fabricated by Scanning Probe Lithography", Nanoletters, 19, 2092-2098 (2019); doi.org/DOI:10.1021/acs.nanolett.9b00271.

258. T. Ghonge, H. C. Koydemir, E. Valera, J. Berger, C. Garcia, N. Nawar, J. Tiao, G. L. Damhorst, A. Ganguli, U. Hassan, A. Ozcan, and R. Bashir, "Smartphone-imaged microfluidic biochip for measuring CD64 expression from whole blood", Analyst, 144, 3925 (2019); doi.org/DOI: 10.1039/c9an00532c.



257. E. Ko, S. J. Yu, G. J. Pagan-Diaz, Z. Mahmassani, M. D. Boppart, S. G. Im, R. Bashir and H. Kong, "Matrix Topography Regulates Synaptic Transmission at the Neuromuscular Junction", Adv Sci, 6, 1001521 (2019); doi.org/10.1002/advs.201801521.

256. L. Grant, R. Raman, C. Caroline, M. C. Ferrall-Fairbanks, G. J. Pagan-Diaz, P. Hadley, E. Ko, M. O. Platt, and R. Bashir, "Long-Term Cryopreservation and Revival of Tissue-Engineered Skeletal Muscle", Tissue Engineering A, 25, 1023 (2019); doi.org/10.1089/ten.tea.2018.0202.

2018

255. R. D. Kamm, R. Bashir, N. Arora, R. D. Dar, M. U. Gillete, L. G. Griffith, M. L. Kemp, K. Kinlaw, M. Levin, A. C. Martin, T. C. McDevitt, R. M. Nerem, M. K. Powers, T. A. Saif, J. Sharpe, S. Takayama, S. Takeuchi, R. Weiss, K. Ye, H. G. Yevick, and M. H. Zaman, "Perspective: The Promise of Multi-cellular Engineered Living Systems", APL Bioengineering, 2, 040901 (2018); doi.org/10.1063/1.5038337.

254. B. Reddy Jr, U. Hassan, C. Seymour, D. C. Angus, T. S. Isbell, K. White, W. Weir, L. Yeh, A. Vincent and R. Bashir, "Point-of-care sensors for the management of sepsis", Nature Biomedical Engineering, 2, 640-648 (2018); doi.org/10.1038/s41551-018-0288-9.

253. A. Ganguli, G.J. Pagan-Diaz, L. Grant, C. Cvetkovic, M. Bramlet, J. Vozenilek, T. Kesavadas, and R. Bashir, "3D Printing for Preoperative Planning and Surgical Training: a review", Biomedical Microdevices, 20:65 (2018); doi.org/10.1007/s10544-018-0301-9.

252. A. Ganguli, Y. Watanabe, M. T. Hwang, J.-C. Huang, and R. Bashir, "Robust label-free micro RNA detection using one millione ISFET array", Biomedical Microdevices, 20:45 (2018); doi.org/10.1007/s10544-018-0290-8.

251. G. J. Pagan-Diaz, X. Zhang, L. Grant, Y. Kim, O. Aydin, C. Cvetkovic, E. Ko, E. Solomon, J. Hollis, H. Kong, T. Saif, M. Gazzola, and R. Bashir, "Simulation and Fabrication of Stronger, Larger, and Faster Walking Biohybrid Machines", Adv. Funct. Mater. 28, 1801145 (2018); DOI: 10.1002/adfm.201801145.

250. E. Valera, J. Berger, U. Hassan, T. Ghonge, J. Liu, M. Rappleye, J. Winter, D.Abboud, Z. Haidry, R. Healey, N.-T. Hung, N. Leung, N. Mansury, A. Hasnain, C. Lannon, Z. Price, K. White, and R. Bashir, "A Microfluidic Biochip Platform for Electrical Quantification of Proteins", Lab on a Chip, 18, 1461-1470 (2018); DOI: 10.1039/C8LC00033F.

249. U. Hassan, R. Zhu, and R. Bashir, "Multivariate Computational Analysis of Biosensor's Data for Improved CD64 Quantification for Sepsis Diagnosis", Lab on a Chip, 18, 1231-1240 (2018); doi:10.1039/C8LC00108A.

248. U. Hassan, E. Valera, and R. Bashir, "Detecting sepsis by observing neutrophil motility", Nature Biomedical Engineering, 2, 197-198(2018); doi:10.1038/s41551-018-0223-0.

247. O.O. Adeniba, E.A. Corbin, R.H. Ewoldt, and R. Bashir, "Optomechanical microrheology of single adherent cancer cell", APL Bioengineering, 2, 016108(2018); doi: 10.1063/1.5010721.

246. L. Lu, Z. Yang, K. Meacham, C. Cvetkovic, E.A. Corbin, A. Vazquez-Guardado, M. Xue, L. Yin, J. Boroumand, G. Pakeltis, T. Sang, K.J. Yu, D. Chanda, R. Bashir, R.W. Gereau, IV, X. Sheng, J.A. Rogers, "Biodegradable Monocrystalline Silicon Photovoltaic Microcells as Power Supplies for Transient Biomedical Implants", Advanced Energy Materials, 2018. doi: 10.1002/aenm.201703035.

245. A. Ganguli, A. Ornob, N. Spegazzini, Y. Liu, G. Damhorst, T. Ghonge, B. Thornton,C.J. Konopka, W. Dobrucki, S.E. Clare, R. Bhargava, A.M. Smith, F. Kosari & R. Bashir, "Pixelated spatial gene expression analysis from tissue", Nature Communications, 9:202 (2018); doi: 10.1038/s41467-017-02623-9

2017

244. C. Cvetkovic, E. Ko, C. Kaufman, L. Grant, and R. Bashir, "Chapter 6: Rapid Prototyping of Soft Bio-Actuators" in 3D Bioprinting in Regenerative Engineering: Principles and Applications, Taylor & Francis, edited by G. Camci-Unal and A. Khademhosseini, 2017.

243. Leonardo Ricotti, Barry Trimmer, Adam Feinberg, Ritu Raman, Kevin Parker, Rashid Bashir, Metin Sitti, Sylvain Marte, Paolo Dario and Arianna Menciassi, "Biohybrid actuators for robotics: A review of devices actuated by living cells", Science Robotics 2, eaaq0495 (2017); doi: 10.1126/scirobotics.aaq0495

242. Tanmay Ghonge, Anurup Ganguli, Enrique Valera, Mariam Saadah, Gregory L. Damhorst, Jacob Berger, Gelson Pagan Diaz, Umer Hassan, Monish Chheda, Zeeshan Haidry, Stan Liu, Carissa Hwu, and Rashid Bashir, "A microfluidic technique to estimate antigen expression on particles", APL Bioengineering 1, 016103 (2017); doi: 10.1063/1.4989380

241. R. Raman and R. Bashir, "Biomimicry, Biofabrication, and Biohybrid Systems: The Emergence and Evolution of Biological Design.", Advanced Healthcare Materials, 2017, 1700496, DOI: 10.1002/adhm.201700496

240. W. Chen, H. Yu, F. Sun, A. Ornob, R. Brisbin, A. Ganguli, V. Vemuri, P. Strzebonski, G. Cui, K. J. Allen, S. A. Desai, W. Lin, D. M. Nash, D. Hirschberg, I. Brooks, R. Bashir, and B. T. Cunningham, "Mobile Platform for Multiplexed Detection and Differentiation of Disease-specific Nucleic Acid Sequences, Using Microfluidic Loop-mediated Isothermal Amplification and Smartphone Detection," Analytical Chemistry, 2017, DOI: 10.1021/acs.analchem.7b02478

239. I. Taneja, Bobby Reddy Jr., G. Damhorst, D. Zhao, U. Hassan, Z. Price, T. Jensen, T. Ghonge, M. Patel, S. Waschpress, J. Winter, M. Rapport, G. Smith, R. Healey, M. Ajmal, M. Khan, J. Patel, H. Rawal, R. Sarwar, S. Soni, B. Davis, J. Kumar, K. White, R. Bashir, R. Zhu, "Predictive Power of Including Novel Biomarker Measurements with Electronic Medical Record Data in Identification of Sepsis", Scientific Reports, 2017. 7: 10800, DOI:10.1038/s41598-017-09766-1

238. A. Ganguli, A. Ornob, H. Yu, G.L. Damhorst, W. Chen, F. Sun, A. Bhuiya, B.T. Cunningham, R. Bashir, "Hands-free smartphone-based diagnostics for simultaneous detection of Zika, Chinkungunya, and Dengue at point-of-care", Biomedical Microdevices (2017), 19:73. DOI 10.1007/s10544-017-0209-9

237. J. Shim, S. Banerjee, H. Qiu, K. Smithe, D. Estrada, J. Bello, E. Pop, K. Schulten, and R. Bashir, "Detection of Biomolecules using Nanopores in CVD grown MoS2 Membrane", Nanoscale (2017), DOI: 10.1039/C7NR03092D

236. U. Hassan, T. Ghonge, B. Reddy, M. Patel, M. Rappleye, I. Taneja, A. Tanna, R. Healey, N. Mansury, Z. Price, T. Jensen, J. Berger, A. Hasnain, E. Flaugher, S. Liu, B. Davis, J. Kumar, R. Bashir, "A point-of-care microfluidic biochip for quantification of CD64 expression from whole blood for sepsis stratification", Nature Communications 8, 15949 (2017), doi: 10.1038/ncomms15949

235. C. Cvetkovic, M. Rich, R. Raman, H. Kong, and R. Bashir, "A 3D Printed Platform for Modular Neuromuscular Motor Units," Microsystems and Nanoengineering, June 19, 2017. DOI: 10.1038/micronano.2017.15

234. C. Cvetkovic, M. C. Ferrall-Fairbanks, E. Ko, L. Grant, H. J. Kong, M. O. Platt & R. Bashir,, "Investigating the Life Expectancy and Proteolytic Degradation of Engineered Skeletal Muscle Biological Machines", Scientific Reports, 7, Article Number: 3775, (2017), doi:10.1038/s41598-017-03723-8

233. R. Raman, L. Grant, Y. Seo, C. Cvetkovic, M. Gapinske, A. Palasz, H. Dabbous, H. Kong, P. P. Pinera, and R. Bashir, "Damage, Healing, and Remodeling in Optogenetic Skeletal Muscle Bioactuators", Advanced Healthcare Materials, 1700030, 2017, DOI: 10.1002/adhm.201700030

232. C. Duarte-Guevara, V. V. Swaminathan, B. Reddy, Jr., T. -T. Chen, C. -H. Wen, Y. J. Huang, J. C. Huang, Y. Liu, and R. Bashir, "Over one million ISFET array", Sensors and Actuators B: Chemical, Vol. 250, Pages 100-110, 2017

231. R. Raman, C. Cvetkovic, R. Bashir, "A modular approach to the design, fabrication and characterization of muscle-powered biological machines", Nature Protocol, 12(3), 519-533, 2017. DOI.10.1038/nprot.2016.185



230. E. A. Corbin, O. O. Adeniba, O. V. Cangellaris, W. P. King, R. Bashir, "Evidence of differential mass change rates between human breast cancer cell lines in culture", Biomedical Microdevices, 19(1), 1-7, 2017. DOI. 10.1007/s10544-017-0151-x

2016

229. E.A. Corbin, A. Yekrang Safakar, O. Adeniba, A. Gupta, K. Park, and R. Bashir, "Integrated Cantilever Based Biosensors for the Detection of Chemical and Biological Entities" chapter in Nanotechnology in Biology and Medicine, 2nd Edition, CRC Press, 2016.

228. R. Bashir, "Microcantileers track single-cell mass", Nature Biotechnology, Vol. 34, 1125-1126, 2016. DOI:10.1038/nbt.3725.

227. C. Duarte-Guevara, V. V. Swaminathan, B. Reddy, Jr., T. T. Chen, C. H. Wen, Y. J. Huang, J. C. Huang, Y. Liu, and R. Bashir, "Multiplexed label-free electrical detection of loop mediated isothermal amplification for the detection of foodborne bacterial pathogens", RSC Advances, 2016, 6, 103872, DOI: 10.1039/C6RA19685C.

226. E. Krueger, J. Shim, A. Fathizadeh, A. N. Chang, B. Subai, K. Yocham, Katie, P. Davis, E. Graugnard, F. Khalili-Araghi, R. Bashir, D. Estrada, D. Fologea, "Modelling and Analysis of Intercalant Effects on Circular DNA Conformation", ACS Nano, 2016, Sep 27;10(9):8910-7. doi: 10.1021/acsnano.6b04876

225. R. Raman, M. Mitchell, P. Perez-Pinera, R. Bashir, L. DeStefano, "Integrating Design-Thinking and the Scientific Method into Undergraduate Biomedical Engineering Curriculum", Journal of Biological Engineering, 2016. 10:10, DOI: 10.1186/s13036-016-0032-5.

224. M. Melhem, J. Park, L. Knapp, L. Reinkensmeyer, M. Lee, J. Flewellyn, C. Cvetkovic, T. Jensen, R. Bashir, H. J. Kong, L. Schook, "3D printed stem cell-laden, microchanneled hydrogel patch for the enhanced release of cell-secreting factors and treatment of myocardial infarctions", ACS Biomater. Sci. Eng., DOI: 10.1021/acsbiomaterials.6b00176.

223. S. Choi, G. Lee, M. Son, I. S. Park, W. Kim, H. Lee, S.-Y. Lee, S. Na, D. S. Yoon, R. Bashir, J. Park, and S. W. Lee, "Detection of Silver Ions Using Dielectrophoretic Tweezers-Based Force Spectroscopy", Analytical Chemistry, 2016. DOI: 10.1021/acs.analchem.6b00107



222. P. Duarte-Guevara, C. Duarte-Guevara, A. Ornob, and R. Bashir, "On-Chip PMA labeling of foodborne pathogenic bacteria for viable qPCR and qLAMP detection", Microfluidics and Nanofluidics, 2016. 20(8), 1-9, DOI, 10.1007/s10404-016-1778-2

221. R. Raman, N. E. Clay, S. Sen, M. Melhem, E. Qin, H. Kong, R. Bashir, "3D printing enables separation of orthogonal functions within a hydrogel particle", Biomedical Microdevices, 2016, 5, 23; doi:10.1007/s10544-016-0068-9

220. P. Dak, A. Ebrahimi, V. Swaminathan, C. Duarte-Guevara, R. Bashir, M. A. Alam, "Droplet-based Biosensing for Lab-on-a-Chip Platforms", Biosensors, 2016, 6, 14; doi:10.3390/bios60200

219. A. Mehrnezhad, R. Bashir, and K. Park, "Direct characterization of hydrodynamic loading on a MEMS microstructure", Applied Physics Letters, 2016. Appl. Phys. Lett. 108, 114101, http://dx.doi.org/10.1063/1.4944412

218. I. S. Park, T. J. Kwak, G. Lee, M. S., J. W. Choi, S. Choi, K. Nam, S. Y. Lee, W-J. Chang, K. Eom, D. S. Yoon, R. Bashir, and S. W. Lee, "Biaxial Dielectrophoresis Force Spectroscopy: A Novel Stoichiometric Approach Toward Defining Intermolecular Weak Binding Interactions", ACS Nano, 2016. DOI: 10.1021/acsnano.5b05286

217. U. Hassan, J. B. Reddy, N. Watkins, G. L. Damhorst, R. Bashir, "Microfluidic Biochips for Cell Counting", Nature Protocols, 2016. 11(4), 714-726. 2016.

216. R. Raman, C. Cvetkovic, S. G.M. Uzel, P. Sengupta, R. D. Kamm, & R. Bashir, "Optogenetic Skeletal Muscle-Powered Adaptive Biological Machines", PNAS, 2016. 113 (13), 3497-3502

215. J. B. Reddy, E. Salm, R. Bashir, "Electrical Chips for Biological Point-of-Care Detection", Annual Review of Biomedical Engineering, Vol. 18, 329-55, 2016.

214. E. Corbin*, O. Adeniba*, R. H. Ewoldt, R. Bashir, "Dynamic Mechanical Measurements of the Viscosity of Single Adherent Cells", Applied Physics Letters, 2016. 108, 093701.

213. S. Shim, J. Shim, W. R. Taylor, F. Kosari, G. Vasmatzis, D. A. Ahlquist, R. Bashir, "Magnetophoretic-Based Microfluidic Device for DNA Concentration", Biomedical Microdevices, 2016. 18(2), 1-8, DOI: 10.1007/s10544-016-0051-5

212. R. Raman, B. Bhaduri, A. Shkumatov, M. K. Lee, M. Mir, G. Popescu, H. Kong, R. Bashir, "High-Resolution Projection Micro-Stereolithography for Patterning of Neovasculature", Advanced Healthcare Materials, 2016. 2016 Mar;5(5):610-9. doi: 10.1002/adhm.201500721.DOI: 10.1002/adhm.201500721 (Back Cover Article)



2015

211. R. Raman and R. Bashir, "Stereolithographic 3D Bioprinting for Biomedical Applications" in Essentials of 3D Biofabrication and Translation, Elsevier Press, edited by Anthony Atala and James Yoo (Eds.). 2015.

210. U. Hassan, B. Reddy, Jr., G. Damhorst, O. Sonoiki, T. Ghonge, C. Yang, and R. Bashir, "A microfluidic biochip for complete blood cell counts at the point-of-care", Technology, 2015. 3(4): 201-213, DOI 10.1142/S2339547815500090

209. G. L. Damhorst, C. Duarte-Guevara, W. Chen, Tanmay Ghonge, B. Cunningham, and R. Bashir, "Smartphone-imaged HIV-1 reverse transcription loop-mediated isothermal amplification (RT-LAMP) on a chip from minimally-processed whole blood samples", Engineering, 2015. 1(3): 324-335, DOI 10.15302/J-ENG-2015072

208. O. Khatib, J. D. Wood, A. S. McLeod, M. Goldflam, M. Wagner, G. L. Damhorst , J. C. Koepke , G. P. Doidge, A. Rangarajan, R. Bashir, E. Pop , J. W. Lyding, M. Thiemens, F. Keilmann, and D. N. Basov, "Graphene-based platform for nano-scale infrared near-field nano-spectroscopy of biomolecules in aqueous media", ACS Nano, 2015. DOI: 10.1021/acsnano.5b01184.

207. K. Park, E. Corbin, R. Bashir, "Optomechanical measurement of the stiffness of single adherent cells", Lab on Chip, 2015. Lab on a Chip, 2015, DOI: 10.1039/C5LC00444F

206. D. Neal, M. S. Sakar, R. Bashir, and H. H. Asada, "Mechanical Characterization and Shape Optimization of Fascicle-Like 3D Skeletal Muscle Tissues Contracted with Electrical and Optical Stimuli", Tissue Engineering-Part A, 2015. doi:10.1089/ten.tea.2014.0317

205. H. Hu*, S. Banerjee*, D. Estrada, R. Bashir, W. P. King, "Tip-Based Nanofabrication of Arbitrary Shapes of Graphene Nanoribbons for Device Applications", RSC Advances, 2015. DOI: 10.1039/C5RA04257G

204. C. Duarte-Guevara, V. Swaminathan, M. Burgess, B. Reddy, Jr., E. Salm, Y. Liu, J. Rodriguez-Lopez, and R. Bashir, "On-chip metal/polypyrrole quasi-reference electrodes for robust ISFET operation", Analyst, 2015, DOI:10.1039/C5AN00085H

203. V. Chan, D. Neal, S. Uzel, R. Bashir, R. Kamm, and H. Harry Asada, "Fabrication and Formation of Optogenetic, Multi-Strip Cardiac Muscles", Lab on Chip, 2015, DOI: 10.1039/c5lc00222b.

202. S. Chien, R. Bashir, R. M. Nerem, R. Pettigrew, "Engineering as a New Frontier for Translational Medicine", Science Translational Medicine, 2015. Vol. 7 no. 281 pp. 281fs13, DOI:10.1126/scitranslmed.aaa4325

201. V. V. Swaminathan, B. Reddy Jr., E. Salm, P. Dak, C. Duarte-Guevara, A. Fischer, M. A. Alam, and R. Bashir, "Electronic desalting for controlling the ionic environment in droplet-based biosensing platforms", Appl. Phys. Lett. 106, 053105 (2015); DOI: 10.1063/1.4907351.

200. J. Shim, Y. Kim, G. Humphrey, S. Myong, A. Nardulli, F. Kosari, G. Vasmatzis, W. Taylor, D. Ahlquist, and R. Bashir, "Solid State Nanopores for Detection of Methylation in Double-Strand DNA Fragments", ACS Nano, 2015. Vol. 9, No. 1, pp. 290–300..

199. G. Damhorst, M. Murtagh, W. R. Rodriguez, R. Bashir, "Microfluidics and Nanotechnology for Detection of Global Infectious Diseases", Microfluidics and Nanotechnology for Detection of Global Infectious Diseases”, Proceedings of the IEEE, 2015 103, 2, Page(s):150 – 160, (Invited Review).

198. V. V. Swaminathan, M. Shannon, R. Bashir, "Enhanced sub-micron colloidal particle separation with interdigitated microelectrode arrays using mixed AC/DC dielectrophoretic scheme", Biomedical Microdevices, 2015, 17 (2), pp. 1-9.

197. M.K. Lee, M.H. Rich, A. Shkumatov, J.H. Jeong, M.D. Boppart, R. Bashir, M.U. Gillette, J. Lee, H.J. Kong, "Glacier Moraine Formation-Mimicking Colloidal Particle Assembly in Microchanneled, Bioactive Hydrogel for Guided Vascular Network Construction". 2015. Advanced Healthcare Materials, 4: 169. doi: 10.1002/adhm.201570008.

196. Seung-Kyun Kang, Suk-Won Hwang, Sooyoun Yu, Jung-Hun Seo, Elise A. Corbin, Jiho Shin, Dae Seung Wie, Rashid Bashir, Zhenqiang Ma, and John A. Rogers, "Biodegradable Thin Metal Foils and Spin-On Glass Materials for Transient Electronics", Adv. Funct. Mater. 2015, DOI: 10.1002/adfm.201403469

2014

195. S. Banerjee, J. Wilson, E. Corbin, J. Shim, A. Aksimentiev, R. Bashir, "Slowing DNA Transport Using Graphene-DNA interactions", Advanced Functional Materials, 2014. 22 DEC 2014, DOI: 10.1002/adfm.201403719

194. M. H. Rich, Min Kyung Lee, Kwanghyun Baek, Jae Hyun Jeong, Larry J Millet, Rashid Bashir, Hyun Joon Kong, "Material-Mediated Proangiogenic Factor Release Pattern Modulates Quality of Regenerated Blood Vessels", Journal of Controlled Release, Vol. 196, 28 December 2014, Pages 363-369

193. E. A. Corbin, F. Kong, C. T. Lim, W. P. King, and R. Bashir, "Biophysical Properties of Human Breast Cancer Cells Measured Using Silicon MEMS Resonators", Lab Chip, 2014. DOI: 10.1039/C4LC01179A

192. J.A. Shepard Neiman, R. Raman, V. Chan, M. G. Rhoads, M. B. Raredon, R. Bashir, P. T. Hammond, L. G. Griffith. "Photopatterning of Hydrogel Scaffolds Coupled to Filter Materials Using Stereolithography for Perfused 3D Culture of Hepatocytes", Biotechnology & Bioengineering, Vol. 112, 5 November 2014, Pages 777-787. DOI: 10.1002/bit.25494

191. U. Hassan, R. Bashir "Coincidence Detection of Heterogeneous Cell Populations from whole blood with Coplanar Electrodes in a Microfluidic Impedance Cytometer", Lab Chip, 2014, 14 (22), 4370 - 4381

190. C. Duarte-Guevara, F.L. Lai, C.W. Cheng, B. Reddy, Jr., E. Salm, V. Swaminathan, Y.K. Tsui, H.C. Tuan, A. Kalnitsky, Y. Liu, and R. Bashir, "Enhanced Biosensing Resolution with Foundry Fabricated Individually Addressable Dual-Gated ISFETs", Analytical Chemistry, 86 (16). DOI: 10.1021/ac501912x

189. E. Salm, Y. Zhong, B. Reddy, Jr., C. Duarte-Guevara, V. Swaminathan, Y. Liu, and R. Bashir, "Electrical Detection of Nucleic Acid Amplification Using an On-Chip Quasi-Reference Electrode and a PVC REFET", Analytical Chemistry, 2014, 86 (14). DOI: 10.1021/ac500897t

188. P. Bajaj, J. A. Rivera, D. Marchwiany, V. Solovyeva, R. Bashir, "Graphene-Based Patterning and Differentiation of C2C12 Myoblasts", Advanced Healthcare Materials, 2014, DOI: 10.1002/adhm.201300550.

187. C. Cvetkovic*, R. Raman*, V. Chan, B. J. Williams, M. Tolish, P. Bajaj, M. L. Sakar, H. H. Asada, M. T. A. Saif, R. Bashir, "Three-dimensionally printed biological machines powered by skeletal muscle". PNAS, 2014, DOI: 10.1073/pnas.1401577111.

186. I. Cho, A. Radadia, K. Farrokhzad, E. Ximenes, E. Bae, A. K. Singh, H. Oliver, M. Ladisch, A. K. Bhunia, B. Applegate, L. Mauer, R. Bashir, J. Irudayaraj, "Nano/Micro and Spectroscopic Approaches to Food Pathogen Detection,". Annual Review in Analytical Chemistry, Invited Review, 2014. 7:15.1–15.24, 10.1146/annurev-anchem-071213-020249.

185. U. Hassan, R. Bashir, "Electrical Cell Counting Process Characterization in a Microfluidic Impedance Cytometer,". Biomedical Microdevices, 2014, DOI 10.1007/s10544-014-9874-0

184. S.W. Hwang, G. Park, C. Edwards, E. Corbin, S. Kang, H. Cheng, J. Song, J. Kim, S. Yu, J. Ng, J. Lee, C. Yee, B. Bhaduri, Y. Su, F. G. Omennetto, Y. Huang, R. Bashir, L. Goddard, G. Popescu, K. Lee, and J. A. Rogers, "Chemistry and biocompatibility of single crystalline silicon nanomembranes and associated materials for transient electronics,". ACS Nano, Publication Date (Web): March 31, 2014, DOI: 10.1021/nn500847g

183. P. Bajaj, R. M. Schweller, A. Khademhosseini, J. L. West, R. Bashir, "3D Biofabrication Strategies for Tissue Engineering and Regenerative Medicine,". Annual Review of Biomedical Engineering, Vol. 16, Issue 1, 2014.

182. E. Corbin, L. J. Millet, K. R. Keller, W. P. King, and R. Bashir, "Measuring Physical Properties of Neuronal and Glial Cells in Primary Culture with Resonant Microsensors,". Analytical Chemistry, 2014, April 15, 2014, DOI: 10.1021/ac5000625.

181. U. Hassan, N.N. Watkins, C. Edwards, R. Bashir, "Flow Metering Characterization within an Electrical Cell Counting Microfluidic Device", Lab on Chip, 2014, DOI: 10.1039/C3LC51278A.

180. E. A. Corbin, B. R. Dorvel, L. J. Millet, W. P. King, and R. Bashir, "Micro-patterning of Mammalian Cells on Suspended MEMS Resonant Sensors for Long-Term Growth Measurements", Lab on Chip, 2014, DOI: 10.1039/C3LC51217G

179. V. Chan, H. Asada, R. Bashir, "Utilization and Control of Bioactuators Across Multiple Length Scales,". Lab on Chip, 2014, 14, (4), 611–816. Cover Article.

178. G. Popescu, K. Park, M. Mir, R. Bashir, "New Technologies for Measuring Single Cell Mass,". Lab Chip, 2014, 14 (4), 646 - 652.

2013

177. N. N. Watkins, U. Hassan, G. Damhorst, H. Ni, A. Vaid, W. Rodriguez, R. Bashir, "Microfluidic CD4+ and CD8+ T lymphocyte counters for point-of-care HIV diagnostics using whole blood." Science Translational Medicine Vol. 5, Issue 214, p. 214ra170, 2013. Cover Article.

176. B. Dorvel, J. B. Reddy, R. Bashir, "Effect of Biointerfacing Linker Chemistries on the Sensitivity of Silicon Nanowires for Protein Detection", Analytical Chemistry, 85 (20), pp 9493-9500, 2013.

175. U. Hassan, R. Bashir, "Research Highlights: Highlights from the latest articles in nanomedicine", Nanomedicine, 8(9), 1369-1371, 2013.

174. R. D. Kamm and R. Bashir, "Creating Living Machines", Annals of Biomedical Engineering, DOI 10.1007/s10439-013-0902-7, 2013.

173. J. Shim, J. A. Rivera, and R. Bashir, "Electron beam induced local crystalization of HfO2 nanopores for biosensing applications", Nanoscale, 2013, 5 (22), 10887-10893. Cover Article.

172. Y. Zhang, H. Keum, K. Park, R. Bashir, and S. Kim, "Micro-Masonry of MEMS Sensors and Actuators", Accepted in IEEE/ASME Journal of Microelectromechanical Systems, 2013, DOI: 10.1109/JMEMS.2013.2273439.

171. A. Ebrahimi, P. Dak, E. Salm, S. Dash, S. Garimella, R. Bashir, M. Alam, "Nanotextured Superhydrophobic Electrodes enable Detection of attomolar-scale DNA concentration within a Droplet by non-Faradaic Impedance Spectroscopy", Lab Chip, 2013, Accepted Manuscript, DOI: 10.1039/C3LC50517

170. K. Baek, J. H. Jeong, A. Shkumatov, R. Bashir, and H. Kong, "In Situ Self-Folding Assembly of Multi-Walled Hydrogel Tube for Uniaxial, Sustained Molecular Release", Advanced Materials, Adv. Mater. DOI: 10.1002/adma.201300951, 2013. Inside cover article.

169. G. Damhorst, C. Smith, E. Salm, M. Sobieraj, H. Ni, H. Kong, R. Bashir, "A liposome-based ion release impedance sensor for biological detection,". Biomedical Microdevices, 2013. DOI 10.1007/s10544-013-9778-4.

168. C. Duarte, E. Salm, B. Dorvel, B. Reddy Jr., and R. Bashir, "On-Chip parallel detection of foodborne pathogens using loop-mediated isothermal amplification", Biomedical Microdevices, 2013. DOI 10.1007/s10544-013-9769-5

167. R. Bashir, "Direct DNA Sequencing Using Nanopore Sensors", Genetic Engineering News '60 Years of DNA' Issue. Vol. 33, no. 7. pp34-35. 2013.

166. J. Schmidt, J. Jeong, V. Chan, K. Baek, M. Lai, C. Cha, R. Bashir, H. Kong, "Tailoring the Dependency between Rigidity and Water Uptake of a Microfabricated Hydrogel with the Conformational Rigidity of a Polymer Cross-linker", Biomacromolecules, 2013. DOI: 10.1021/bm302004v

165. G. Damhorst, N. N. Watkins, R. Bashir, "Micro and nanotechnology for HIV/AIDS diagnostics in resource-limited settings", IEEE Transaction of Biomedical Engineering, 60 (3), 715-726, 2013.

164. V. Chan, R. Raman, C. Cvetkovic, and R. Bashir, "Enabling Micro- and Nano-Scale Approaches for Bioengineered Cardiac Tissue", ACS Nano, 2013, 7 (3), pp 1830-1837.

163. J. Shim, G. Humphreys, B.M. Venkatesan, J.M. Munz, X. Zou, C. Sathe, K. Schulten, F. Kosari, A. Nardulli, G. Vasmatzis, and R. Bashir, "Detection and Quantification of Methylation in DNA using Solid-State Nanopores," Scientific Reports, 3, 1389, 2013.

162. B. Bhaduri, D. Wickland, R. Wang, V. Chan, R. Bashir, and G. Popescu, "Cardiomyocyte Imaging Using Real Time Spatial Light Interference Microscopy Imaging (SLIM)," PLOS One, 8 (2), e56930, 2013.

161. E. Salm, C. Duarte, P. Dak, B. Dorvel, B. Reddy Jr., A. Alam, and R. Bashir, "Ultra-localized Thermal Reactions in Sub-Nanoliter Droplets-in-Air," PNAS, DOI:10.1073/pnas.1219639110, 2013.

160. A. Chen, T. Byvank, W.-J. Chang, A. B., G. Vieira, B. Miller, J. J. Chalmers, R. Bashir, and R. Sooryakumar, "On-chip Magnetic Separation and Cell Encapsulation in Droplets", Lab on Chip, DOI: 10.1039/c2lc41201b, 2013.

159. B. Dorvel, G. Damhorst, V. Chan, J. Shim, S. Banerjee, C. Cvetkovic, R. Raman, R. Bashir, "Research Highlights from the last year in nanomedicine", Nanomedicine, 8(1), 13-15, 2013.

158. S. Banerjee, J. Shim, J. Rivera, X. Jin, D. Estrada, V. Solovyeva, X. You, J. Pak, E. Pop, N. Aluru, R. Bashir, "Electrochemistry at Edge of Single Graphene Layer in a Nanopore", ACS Nano, 7 (1), pp 834-843, 2013.

157. E. A. Corbin, L. J. Millet, J. H. Pikul, C. L. Johnson, J. G. Georgiadis, W. P. King, and R. Bashir. "Examining the Micromechanical Properties of Hydrogels Using MEMS Resonant Sensors," Biomedical Microdevices, 10.1007/s10544-012-9730-z, 2013.

156. P. Bajaj, D. Marchwiany, C. Duarte, and R. Bashir, "Patterned Three Dimensional Encapsulation of Embryonic Stem Cells Using Dielectrophoresis and Stereolithography". Advanced Healthcare Materials, DOI: 10.1039/c2lc40837f, 2013.

155. N. Jokilaakso, E. Salm, A. Chen, L. Millet, C. Duarte Guevara, B. Dorvel, B. Reddy Jr., A. Eriksson Karlstrom, Y. Chen, H. Ji, R. Sooryakumar, and R. Bashir, "Ultra-localized Single Cell Electroporation using Silicon Nanowires,". Lab on Chip, 2013, DOI: 10.1039/C2LC40837F. Inside Cover Article.

2012


154. V. Chan, K. Park, M. B. Collens, T. A. Saif, H. Kong, and R. Bashir, "Walking Biological Machines with Hydrogels and Cardiomyocytes using a 3D Stereo-Lithographic Printer." Sci. Rep. 2, 857; DOI:10.1038/srep00857, 2012.

153. E. J. De Souza, W. Ahmed, V. Chan, R. Bashir, M. T. A. Saif, "Cardiac myocytes' dynamic contractile behavior differs depending on heart segment". Biotechnology and Bioengineering, DOI: 10.1002/bit.24725.

152. I. S. Park, K. Eom, T. J. Kwak, J. S. Son, W. J. Chang, T. Kwon, D. S. Yoon, R. Bashir, and S. W. Lee, "Microfluidic Multifunctional Probe Array Dielectrophoretic Force Spectroscopy with Wide Loading Rate". ACS Nano, Vol 6, No. 10, 8665-8673, 2012.

151. V. Chan, M.B. Collens, J.Jeong, K. Park, H. Kong, and R. Bashir. "Directed Cell Alignment on Protein-Printed 3D Stereolithographic Hydrogels". Virtual and Physical Prototyping, Special Issue on Stereolithography, 7(3): 219-228, 2012

150. B. R. Dorvel, J. B. Reddy, Jr., J. Go, C. D. Guevara, E. Salm, M. A. Alam, and R. Bashir, "Fabrication of High-k Hafnium Oxide Based Silicon Nanowires for Sensitive Detection of Small Nucleic Acid Oligomers", ACS Nano, VOL. 6, NO. 7, 6150-6164.2012.

149. J. Go, P. R. Nair, B. Reddy Jr., B. Dorvel, R. Bashir, and M. A. Alam. "Coupled Heterogeneous 'Nanowire-Nanoplate' Planar Transistor Sensors for Giant (>10V/pH) Nernst Response". ACS Nano, VOL. 6, NO. 7, 5972-5979, 2012.

148. L. J. Millet, E. A. Corbin, R. Free, K. Park, W. P. King, and R. Bashir. "Characterization of Mass and Swelling of Hydrogel Microstructures using MEMS Resonant Mass Sensor Arrays". Small, Vol. 8, No. 16, 2555-2562, 2012.

147. K. Park, J. Shim, V. Solovyeva, E. Corbin, S. Banerjee, and R. Bashir, "Hydrodynamic loading and viscous damping of patterned perforations on microfabricated resonant structures". Applied Physics Letters, 2012.

146. K. Park, N. Kim, D. T. Morisette, N. Aluru, and R. Bashir, "Resonant MEMS Mass Sensors for Measurement of Micro-droplet Evaporation". IEEE/ASME JMEMS, DOI: 10.1109/JMEMS.2012.2189359.

145. R. Bashir, "Nanobiosciences" Point of View Article, Proceedings of the IEEE, 100, 5, DOI: 10.1109/JPROC.2012.2187362, 2012 , 1015 - 1016.

144. G. Credo, X., Su, D. Liu, K. Wu, O. Elibol, J. B. Reddy, T.-W. Tsai, B. Dorvel, J. Daniels, R. Bashir, M. Varma, "Specific detection of pyrophosphate from DNA polymerase reactions by chemically functionalized field-effect sensors", Analyst, DOI: 10.1039/c2an15930a, 2012.

143. J. H. Jeong, V. Chan, C. Cha, P. Zortuluna, C. Dyck, K. Jimmy Hsia, R. Bashir, H. J. Kong, ""Living" Microvascular Stamp for Patterning of Functional Neovessels; Orchestrated Control of Matrix Property and Geometry". Advanced Materials, Vol. 24, No. 1, January 3, 2012, Cover Article (1. supplementary information)

142. V. Chan, J. H. Jeong, P. Bajaj, M. Collens, T. Saif, H. J. Kong, R. Bashir, "Multi-Material Bio-Fabrication of Hydrogel Cantilevers and Actuators with Stereolithography". Lab on Chip, 2012, 12, 88-98. Back Cover Article.

141. B. M. Venkatesan, D. Estrada, S. Banerjee, X. Jin, V. E. Dorgan, M. Bae, N. Aluru, E. Pop, and R. Bashir, "Stacked Graphene-Al2O3 Nanopore Sensors for Sensitive Detection of DNA and DNA-Protein Complexes". ACS Nano, Vol. 6, No. 1, 441-450, 2012.

2011


140. M. Venkatesan and R. Bashir, "Solid State Nanopore Sensors" in S.M. Iqbal and R. Bashir (Eds.), Nanopores: Sensing and Fundamental Biological Interactions, Springer, 2011.

139. N. Watkins, D. Irimia, M. Toner, R. Bashir, "On a Chip", in November/December 2011 issue of IEEE Pulse, A Magazine in the IEEE Engineering and Medicine Biology Society. Co-Guest Editors, R. Bashir, A. Khademhosseini, S. Sia.

138. L. J. Millet, M. B. Collens, G. L. Perry, and R. Bashir, "Spatial distribution and analysis of neurons in culture". Integrative Biology, DOI: 10.1039/C1IB00054C, 2011.

137. P. Bajaj, B. Reddy, L. Millet, C. Wei, P. Zorlutuna, G. Bao, and R. Bashir, "Patterning the differentiation of C2C12 skeletal myoblasts". Integrative Biology, 2011, 3, 897-909.

136. E. Salm, Y-S. Liu, D. Marchwiany, D. T. Morisette, Y. He, A. K. Bhunia, and R. Bashir, "Electrical Detection of dsDNA and Polymerase Chain Reaction Amplification". Biomedical Microdevices, 2011, Volume 13, Number 6, Pages 973-982 (1. erratum)

135. B. M. Venkatesan and R. Bashir, "Nanopore Sensors for Nucleic Acid Analysis". Nature Nanotechnology, 2011, 10.1038/nnano.2011.129.

134. P. Zorlutuna, J. H. Jeong, H. Kong, and R. Bashir, "3-Dimensional Polymer Microenvironments for Examining Spatial Cellular Interaction". Adv. Funct. Mater. 2011, 21, 3642-3651.

133. M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. Prasanth, G. Popescu, "Optical Measurement of Cell Cycle Dependent Mass Growth". PNAS, 2011, doi/10.1073/pnas.1100506108.

132. D. J. Liu, G. M. Credo, X. Su, K. Wu, H. C. Lim, O. H. Elibol, R. Bashir, and M. Varma, "Surface Immobilizable Chelator for Label-free Electrical Detection of Pyrophosphate". Chemical Communications, 10.1039/c1cc12073e, 2011.

131. E. Lidstone, V. Chaudhery, A. Kohl, V. Chan, T. Wolf-Jensen, L. Schook, R. Bashir, and B. Cunningham, "Label-free imaging of cell attachment with photonic crystal enhanced microscopy". Analyst, 2011, DOI: 10.1039/c1an15171a.

130. B. M. Venkatesan, J. Polans, J. Comer, S. Sridhar, D. Wendell, A. Aksimentiev, and R. Bashir, "Lipid Bilayer Coated Al2O3 Nanopore Sensors: Towards A Hybrid Biological Solid-State Nanopore", Biomedical Microdevices, DOI: 10.1007/s10544-011-9537-43, 2011.

129. X. Tang, P. Bajaj, R. Bashir, T. Saif, "How far cardiac cells can see each other mechanically", Soft Matter, 10.1039/C0SM01453B, 2011. Cover Article

128. A. D. Radadia, C. J. Stavis, R. Carr, H. Zeng, W. King, J. A. Carlisle, A. Aksimentiev, R. J. Hamers, R. Bashir, "Ultrananocrystalline diamond thin films as stable antibody tethering surfaces for bacterial capture", Adv. Funct. Mater. 2011, 21, 1040-1050. Cover Article

127. Z. Wang, L. Millet, V. Chan, H. Ding, M. U. Gillette, R. Bashir, and G.l Popescu, "Label-free intracellular transport measured by Spatial Light Interference Microscopy", Journal of Biomedical Optics, 16, 026019, Feb 28, 2011, doi:10.1117/1.3549204. Also selected for Virtual Journal of Biological Physics Research.

126. N. N. Watkins, S. Sridhar, X. Cheng, M. Toner, W. Rodriguez, and R. Bashir, "A microfabricated electrical differential counter for the selective enumeration of CD4+ T lymphocytes", Lab Chip, 2011, 11, 1437-1447. Cover Article. Also selected as Hot Article on RSC Website.

125. J. B. Reddy, Jr., Brian R. Dorvel, J. Go, P. Nair, O. H. Elibol, G. M. Credo, J. S. Daniels, E. K.C. Chow, M. Madoo, M. A. Alam, and R. Bashir, "Fabrication and Characterization of Nanowire and Nanoplate Field Effect pH Sensors", Biomed Microdevices, DOI 10.1007/s10544-010-9497-2011.

124. J. B. Reddy, O. H. Elibol, P. R. Nair, B. R. Dorvel, F. Butler, Z. Ahsan, D. E. Bergstrom, M. A. Alam, and R. Bashir "Localized Heating on Silicon Field Effect Transistors: Bio-Chemical Reactions and Device Optimization", Anal. Chem., dx.doi.org/10.1021/ac102566f, 2011.

123. Millet L.J., Park K., Watkins N.N., Hsia K.J., Bashir R., "Separating Beads and Cells in Multi-channel Microfluidic Devices Using Dielectrophoresis and Laminar Flow", JoVE, 2011. 48. 2011 1. http://www.jove.com/index/Details.stp?ID=2545, doi: 10.3791/2545

2010


122. K. Park, L. J. Millet, J. Huan, N. Kim, G. Popescu, N. Aluru, K. J. Hsia, R. Bashir, "Measurement of adherent cell mass and growth", Proc Natl Acad Sci U S A. 2010. doi/10.1073/pnas.1011365107

121. P. Bajaj, X. Tang, T. A. Saif and R. Bashir, "Stiffness of the substrate influences the phenotype of embryonic chicken cardiac myocytes", Journal of Biomedical Materials Research Part A, 2010, DOI: 10.1002/jbm.a.32951

120. N. Privorotskaya, H. Zeng, J. A. Carlisle, R. Bashir, and W. P. King, "Piezoresistive Microcantilevers from Ultrananocrystalline Diamond", IEEE/ASME Journal of Microelectromchanical Systems, Vol. 19, No. 5, 2010, pp. 1234-1242.

119. C. Stavis, T.L. Clare, J. E. Butler, A. D. Radadia, R. Carr, H. Zeng, W. King, J. A. Carlisle, A.i Aksimentiev, R. Bashir, and R. J. Hamers, "Surface functionalization of thin-film diamond for highly stable and selective biological interfaces", Proc Natl Acad Sci U S A, 2010 (10.1073/pnas.1006660107).

118. A.K.M. Newaz, W.-J. Chang, K.D. Wallace, L.C. Edge, S.A.Wickline, R. Bashir, A. M. Gilbertson, L.F. Cohen, and S.A. Solin, "A ballistic Inverse-EOC nanosensor for sub-wavelength high sensitivity room temperature photon detection", Applied Physics Letters, 97, 2010.

117. V. Chan, P. Zorlutuna, J. H. Jeong, H. Kong, R. Bashir, "Three-Dimensional Photopatterning of Hydrogels using Stereolithography for Long-Term Cell Encapsulation", Lab on Chip, 10(16), 2010.Back Cover Article.

116. W. J. Chang*, H.-J. Suk*, A. K. M. Newaz, S. Wickline, S. A. Solin, R. Bashir, "Fluidic Characterization of electric field sensitivity of Ti-GaAs Schottky junction gated field effect biosensors", Biomedical Microdevices, 2010, 12:849-854. *Equal contribution.

115. N. Privorotskaya*, Y. S. Liu*, J. Lee, H. Zeng, J. A. Carlisle, R. Bashir, and W. P. King, "Rapid Thermal Lysis of Cells Using Silicon-Diamond Microcantilever Heaters", Lab Chip, 2010, 10, 1135 - 1141, *Equal contribution.Back Cover Article.

114. B. M. Venkatesan, A.B. Shah, J.M. Zuo, and R. Bashir, "DNA Sensing using Nano-crystalline Surface Enhanced Al2O3 Nanopore Sensors", Advanced Functional Materials, 20, 8, 1266-1275, 2010.Cover Article.

113. B. Dorvel, B. Reddy Jr., I. Block, P. Mathias, S. E. Clare, B. Cunningham, D. E. Bergstrom, and R. Bashir, "Vapor-Phase Deposition of Monofunctional Alkoxysilanes for Sub-Nanometer-Level Biointerfacing on Silicon Oxide Surfaces", Advanced Functional Materials, 20(1), 2010.Inside Cover Article.

2009


112. L. Yang, X. Cheng, Y. Liu, and R. Bashir, "Lab-on-a-chip Impedance Detection of Microbial and Cellular Activity" in N. Yaakov and S. Bhatia (Eds.), Microdevices in Biology and Medicine (series Methods in Bioengineering), Artech House, Boston, MA, 2009.

111. L. Mercado, J.K. Carney, M.J. Ebert, S.A. Hareland, and R. Bashir, "Digital Health and Biomedical Packaging" in D. Lu and C.P. Wong (Eds.), Materials for Advanced Packaging, 2009.

110. N. Watkins, B. M. Venkatesan, M. Toner, W. Rodriguez, R. Bashir, "A Robust Electrical MicroCytometer with 3-Dimensional Hydrofocusing or Portable Blood Analysis", Lab Chip, 2009, 9, 3177-3184.Cover Article.

109. S. H. Baek, W. J. Chang, J. Y. Baek, D. S. Yoon, R. Bashir, S. W. Lee, "A ‘dielectrophoretic force microscopy’ technique for measurement of chemical and biological interactions", Anal. Chem., 2009, 81, 7737–7742. Cover Article.

108. O. H. Elibol, B. Reddy Jr., P. R. Nair, B. Dorvel, F. Butler, Z. Ahsan, D. E. Bergstrom, M. A. Alam, and R. Bashir, "Localized Heating on Silicon Field Effect Transistors: Device Fabrication and Temperature Measurements in Fluid", Lab Chip, 2009, DOI: 10.1039/b906048k.Back Cover Article.

107. I. D. Block, P. C. Mathias, M. Ganesh, S. I. Jones, B. R. Dorvel, V. Chaudhery, L. O. Vodkin, R. Bashir, and B. T. Cunningham, "A Detection Instrument for Enhanced-Fluorescence and Label-Free Imaging on Photonic Crystal Surfaces", Optics Express, Vol. 17, Issue 15, pp. 13222-13235.

106. A.M. Gilbertson, A.K.M. Newaz, Woo-Jin Chang, R. Bashir, S.A. Solin, and L.F. Cohen, "Dimensional crossover and weak localization in ultra thin n-GaAs films", Applied Physics Letters, 95, 012113, 2009.

105. K. Park, H. Suk, D. Akin and R. Bashir "Dielectrophoretic-based cell manipulation using electrodes on reusable printed circuit board", Lab Chip, 2009, 9, 2224 - 2229.Back Cover Article.

104. O. K. Koo, S. Shuaib, Y. Liu, M. R. Ladisch, R. Bashir, and A. K. Bhunia, "Targeted Capture of Pathogenic Bacteria using Mammalian Cell Receptor on Microfluidic Chip", Anal. Chem. 2009, 81, 3094–3101.

103. B. M. Venkatesan, B. Dorvel, S. Yemenicioglu, N. Watkins, I. Petrov, R. Bashir, "Fabrication and characterization of low stress, mechanically robust Al2O3 nanopores for the electronic detection of biomolecules", Advanced Materials, 21(27), 2009, 2771 – 2776.Cover Article.

102. J. M. Moon, D. Akin, Y. Xuan, P. Ye, P. Guo, R. Bashir, "Capture and alignment of phi29 viral particles in sub-40 nanometer porous alumina membranes", Biomedical Microdevices, 11:1 February 2009.

2008



101. S.M. Iqbal and R. Bashir, "Nanoelectronic-Based Detection for Biology and Medicine" in S.Y. Nof (Ed.), Handbook of Automation, Springer, 2008.

100. Y-S. Liu, R. Bashir, "Electrical Detection of DNA Molecules", BMES Bulletin, VOL. 32, No. 3, 2008, pp. 14-15.

99. B. M. Venkatesan, O. H. Elibol, B. Dorvel, K. Park, R. Bashir, "Research Highlights" in News and Views Section, Nanomedicine, 3(5), 613-615, 2008.

98. S. Bhattacharya, D. Gangopadhyay, N. Chanda, S. A. Grant, Y. Liu, P. R Sharp, R. Bashir, K. Gangopadhyay, S. Gangopadhyay, "Low voltage capillary electrophoresis using high conductivity agarose nano-platinum composites", Sensor Letters, 2008.

97. S. Bhattacharya, N. Chanda, Y. Liu, K. Gangopadhyay, R. Bashir, P. R. Sharp, and S. Gangopadhyay, "Enhanced DNA Separation Rates in Nano-Platinum Doped Agarose", Journal of Bionanosciences, Vol. 2, pp1-8, 2008.

96. O. Elibol, J. Reddy, R. Bashir, "Localized heating and thermal characterization of high electrical resistivity silicon-on-insulator sensors using nematic liquid crystals", Applied Physics Letters, Vol.93, Issue 13, 2008.

95. J. Lee, J. Jang, D. Akin, C. A. Savran, and R. Bashir , "Real-time Detection of Air-borne Viruses on a Mass-sensitive Device", Applied Physics Letters. 93, 013901. 2008.

94. L. Yang, P. P Banada, A. K Bhunia and R. Bashir, "Effects of Dielectrophoresis on the Immuno-reactivity, the Growth Profile, and the Viability of Listeria monocytogenes", Journal of Biological Engineering, Journal of Biological Engineering 2008, 2:6 doi:10.1186/1754-1611-2-6.

93. O. Elibol, J. Reddy, R. Bashir, "Nanoscale thickness double-gated field effect silicon sensors for sensitive pH detection in fluid", Applied Physics Letters, 92, 193904 2008. Also selected for the May 15, 2008 issue of Virtual Journal of Biological Physics Research.

92. K. Park, J. Jang, D. Akin, J. Lee, J. Sturgis, J. P. Robinson, D. Irimia, M. Toner, R. Bashir, "Concentration, Growth and Mass Measurements of Mammalian Cells on Silicon Cantilevers", Lab Chip, 2008, 8, 1034-1041.Cover Article.Selected as a Hot Article for the RSC website.

91. J. Jang, D.Akin, R. Bashir, "Effects of Inlet/Outlet Configurations on the Electrostatic Capture of Airborne Nanoparticles and Viruses for Cantilever Biosensors", Meas. Sci. Technol. 19, 2008, 065204.

90. L. Yang, R. Bashir, "Electrical/ Electrochemical Impedance for Rapid Detection of Foodborne Pathogenic Bacteria", Review Article, Biotechnology Progress, Biotechnology Advances 26 (2008) 135 - 150.

89. S. Bhattacharya, S. Salamat, D. Morisette, P. Banada, D. Akin, Y-S. Liu, A. K Bhunia, M. Ladisch, and R. Bashir, "PCR based-detection in a micro-fabricated platform", Lab. Chip., 2008, 8, 1130 - 1136.

88. Y-S. Liu, P. P. Banada, S. Bhattacharya, A. K. Bhunia, and R. Bashir , "Electrical Characterization of DNA Molecules in Solution using Impedance Measurements", Applied Physics Letters, 92, 143902, 2008. Also selected for the April 28, 2008 issue of Virtual Journal of Nanoscale Science & Technology.

2007


87. A. Gupta and R. Bashir, “Integrated Cantilever Based Biosensors for the Detection of Chemical and Biological Entities,” in Nanotechnology in Biology and Medicine, CRC Press, 2007.

86. S. Lee and R. Bashir, “Biological and Chemical-Mediated Self-Assembly of Artificial Micro and Nanostructures,” in Goddard, Brenner, Iafrate, and Lyshevski (Eds.), CRC Handbook of Nanoscience, Engineering, and Technology, 2nd Edition, CRC Press, 2007.

85. S. W. Lee, W. J. Chang, R, Bashir, ""Bottom-up" approach for implementing nano/microstructure using biological and chemical interactions", Biotechnology and Bioprocess Engineering, Volume: 12, 185-199, 2007.

84. G. Zeltzer, J. C. Randel, A. Gupta, R. Bashir, S.-H. Song and H. C. Manoharan, "Scanning optical homodyne detection of high-frequency picoscale resonances in cantilever and tuning fork sensors", Applied Physics Letters, 91, 173124 , 2007.

83. M-R. Choi, Katie J. Stanton-Maxey, C. S. Levin, Rizia Bardhan, Demir Akin, Jennifer Sturgis, J. Paul Robinson, Rashid Bashir, Naomi J. Halas, and Susan E. Clare, "A cellular Trojan Horse for delivery of therapeutic nanoparticles into tumors", Nanoletters, 7(12) pp 3759 - 3765, 2007.

82. K. Park, D. Akin, R. Bashir, "Electrical Capture and Lysing of Viruses in Silicon Nanoprobe Array", Biomedical Microdevices 9:6, December 2007.

81. P. Bajaj, A. Gupta, D. Akin, O. Auciello, R. Bashir, "Characterization of Cell Growth on Ultrananocrystalline Diamond Thin-Films", Biomedical Microdevices, 9:6, December 2007.

80. R. Flores-Perez, A. K. Gupta, R. Bashir, A. Ivanisevic, "Cantilever-Based Sensor for the Detection of Different Chromophore Isomers", Anal. Chem.; 2007; ASAP Article; DOI: 10.1021/ac0703000.

79. D. Akin, J. Sturgis, K. Burkholder, D. Sherman, S. Muhammad, A. Bhunia, J. Paul Robinson, Rashid Bashir, "Bacterial Mediated Delivery of Nanoparticles in Cells", Nature Nanotechnology, 149, 441-449, 2007.. Click here for a commentary in Nature Nanotechnology

78. S. W. Lee, H. Li, and R. Bashir, "Novel Dielectrophoretic Tweezers for Examining Particle-Surface Interactions within Microfluidic Devices", Appl. Phys. Lett. 90, 223902, 28th May 2007. (also selected for June 11, 2007 issue of Virtual Journal of Nanoscale Science & Technology).

77. X. Cheng, Y.-S. Liu, U. Demirci, D. Irimia, L. Yang, L. Zamir, W. Rodriguez, M. Toner, R. Bashir, "Electrical CD4 Counting for Management of HIV-infected Subjects," Special Issue on Cells and Tissue in Microsystems, Lab. Chip., 2007, 7, 746 - 755.

76. S. Bhattacharya, J. Jang, L. Yang, D. Akin, and R. Bashir, "BioMEMS And Nanotechnology Based Approaches For Rapid Detection Of Biological Entities", (Invited Review) Journal of Rapid Methods & Automation in Microbiology 15. 2007. 1-32.

75. Y.-S. Liu, T. M. Walter, W.-J. Chang, K.-S. Lim, L. Yang, S. W. Lee, A. Aronson, and R. Bashir, "Electrical Detection of Germination of Model Bacillus Anthracis Spores in Microfluidic Biochips", Lab. Chip., 2007, 7, 603 - 610.

74. A. P. Davila, J. Jang, A. Gupta, T. Walter, A. Aronson, and R. Bashir, "Microresonator Mass Sensors for Detection of Bacillus Anthracis Sterne Spores in Air and Water", Biosensors & Bioelectronics, Volume 22, Issue 12, 15 June 2007, Pages 3028-3035.

73. S. Iqbal, D. Akin, R. Bashir, "Solid State Nanopores with DNA Selectivity", Nature Nanotechnology, 2, 243 - 248, 01 Apr 2007.

72. A. Gupta, P. Nair, D. Akin, S. Broyles, M. Ladisch, A. Alam, R. Bashir, "Anamolous Resonance in a Nanomechanical Biosensor", Proceedings of National Academy of Sciences, USA. August 28, 2006, 103: 13362-13367.

71. Tom T. Huang, David G. Taylor, Kwan Seop Lim, Miroslav Sedlak, Rashid Bashir, Nathan S. Mosier, and Michael R. Ladisch, "Surface Directed Boundary Flow in Microfluidic Channels", Langmuir, 2006; 22 (14); 6429-6437.

2006


70. H. Chang, M. Venkatesan, S. M. Iqbal, D. Peroulis, G. Andreadakis, F. Kosari, G. Vasmatzis, R. Bashir, "DNA Counterion Current and Saturation Examined by a Solid State Nanopore Sensor", Biomedical Microdevices, Volume 8, Number 3, September, 2006, Pages 263-269.

69. J. Jang, D. Akin, K. S. Lim, S. Broyles, M. R. .Ladisch, and Rashid Bashir, "Capture of Airborne Nanoparticles in Swirling Flows Using Non-Uniform Electrostatic Fields for Bio-Sensor Applications" Sensors and Actuators B: Chemical, Volume 115, Issue 1, 23 May 2006, Pages 189-197.

68. P. P. Banada, Y. Liu, L. Yang, R. Bashir, and A. K. Bhunia, "Performance evaluation of a low conductive Growth Medium for growth of bacteria including Listeria monocytogenes under normal and stress conditions", International Journal of Food Microbiology, Volume 111, Issue 1, 15 August 2006, Pages 12-20.

67. L. Yang, P. Banada, M. R. Chatni, K, Lim, M. Ladisch, A. Bhunia, R. Bashir, "A MultiFunctional Micro-Fluidic System for Dielectrophoretic Concentration Coupled with Immuno-Capture of Low Number of Listeria monocytogenes", Lab Chip, 6, 896-905, 2006. (also selected as an article for the Chemical Biology Virtual Journal (www.rsc.org/chembiolvj)).

66. A. Ghafoor, D. Akin, R. Bashir, "The Delocalization of Vaccinia Genome and Core as Observed by Ex-Situ Atomic Force and Fluorescence Microscopy", Nanobiotechnology, 1, 4, 337-345, 2006.

65. L. Johnson, A. Gupta, D. Akin, A. Ghafoor, R. Bashir, "Detection of Vaccinia Virus Mass using Micromechanical Cantilever Sensors", Sensors and Actuators B: Chemical, Vol 115/1 pp 189-197, 2006.

64. K. S. Lim, W.-J. Chang, Y.-M. Koo, and R. Bashir, "Reliable Fabrication Method of Transferable Micron Scale Metal Pattern for Poly(dimethylsiloxane) Metallization", Lab. Chip., 1, 578 - 580, 2006.

63. H. Chang, S. M. Iqbal., E. A. Stach, A. H. King, N. J. Zaluzec, R. Bashir, "Fabrication and Characterization of Solid State Nanopores using Field Emission Scanning Electron Beam", Applied Physics Letters, 88, 103109, 2006. Also published online in Virtual Journal of Nanoscale Science & Technology, March 20, 2006.

62. N. Z. Butt, A. M. Chang, H. Raza, R. Bashir, J. Liu, and D. L. Kwong, "Low frequency noise statistics for the breakdown characterization of ultrathin gate oxides", Applied Physics Letters, 88, 112901, 2006.

61. H. Li, R. Gomez, and R. Bashir, "Integrated Microsystems for Cellular Analysis and Manipulation," in R. Bashir and S. Wereley (Eds.), Biomolecular Sensing, Processing and Analysis, Vol. 4 of BioMEMS and Biomedical Nanotechnology, Springer, 2006.

60. R. Gomez and R. Bashir, "Microscale Impedance-Based Detection of Bacterial Metabolism," in Encyclopedia of Rapid Microbiological Methods, Vol. 3, pp. 333-362, Michael J. Miller (Series Editor), Davis Healthcare International Publishing (DHI), 2006.

2005

59. S. Lee, R. Bashir, "Dielectrophoresis and Chemically Mediated Assembly of three Terminal Silicon MOSFETS", Advanced Materials, 17, 2671-2677, 2005.

58. L. Yang, P. P. Banada, Y. Liu, A. K. Bhunia, and R. Bashir, "Conductivity and pH Dual Detection of Growth Profile of Healthy and Stressed Listeria monocytogenes", Biotechnology & Bioengineering, 92, 6, 20 December 2005, 685-694.

57. R. Gomez, D. Morrisette, R. Bashir, "Microfluidic BioElectronic Processors for Rapid Detection of Live Bacterial Cells", IEEE/ASME Journal of Microelectromechanical Systems, Vol. 14, No. 4, Aug 2005, pp. 829-838.

56. S. Iqbal, G. Balasubramaium, S. Ghosh, D. Bergstrom, R. Bashir, "Direct Current Electrical Characterization of ds-DNA in Nanogap Junctions", Applied Physics Letters, 86, 11th April, 2005. Also selected for the April 15, 2005 issue of Virtual Journal of Biological Physics Research.

55. H. Li, Y. Zheng, D. Akin, R. Bashir, "Characterization and Modeling of a Micro-Fluidic Dielectrophoresis Filter for Biological Species", IEEE/ASME Journal of Microelectromechanical Systems. Vol. 14, No. 1, February 2005, pp. 105 - 111.

54. A. Gupta, D. Akin, R. Bashir, "Detection of Bacterial Cells and Antibodies Using Surface Micromachined Thin Silicon Cantilever Resonators", Journal of Vaccum Science and Technology-B, Microelectronics and Nanometer Structures, November 2004, Volume 22, Issue 6, pp. 2785-2791.

2004


53. H. Li, R. Bashir, "On the Design and Optimization of Micro-Fluidic Dielectrophoretic Devices: A Dynamic Simulation Study", Biomedical Microdevices, 6:4, 289-295, 2004.

52. R. Bashir, "BioMEMS: State of the Art in Detection and Future Prospects", Invited Paper in Advanced Drug Delivery Review, Special issue: Intelligent Therapeutics: Biomimetic Systems and Nanotechnology in Drug Delivery, Edited by N.A. Peppas, Vol 56/11 pp 1565-1586, 2004.

51. H. Chang, F. Kosari, G. Andreakakis, M. A. Alam, G. Vasmatzis, R. Bashir, "DNA Mediated Fluctuations in Ionic Current through Silicon Oxide Nano-Channels", Nano Letters vol. 4, No. 8, 1551-1556, 2004.

50. A. Gupta, D. Akin, R. Bashir, "Single virus particle mass detection using microresonators with nanoscale thickness", Applied Physics Letters, Vol. 84, No. 11, pp. 1976-1978, 15th March 2004.

49. D. Akin, H. Li, R. Bashir, "Real-Time Virus Trapping and Fluorescent Imaging in Micro-fluidic Devices", Nano Letters, 4(2) pp 257 - 259, 2004.

2003


48. T. T. Huang, W.-J. Chang, D. Akin, R. Gomez, R. Bashir, N. Mosier, and M. R. Ladisch, "Fabrication Of Microfluidic Channels Using Microfiber With Poly(Dimethylsiloxane)", AICHE Journal, November 2003, Vol. 49, No. 11, pp. 2984-2987.

47. O. H. Elibol, D. Morisette, D. Akin, R. Bashir, "Integrated Nano-Scale Silicon Sensors Using Top-Down Fabrication", Applied Physics Letters. Volume 83, Issue 22, pp. 4613-4615, December 1, 2003.

46. W.-J. Chang, D. Akin, M. Sedlek, M. Ladisch, R. Bashir, "Hybrid Poly(dimethylsiloxane) (PDMS)/Silicon Biochips For Bacterial Culture Applications", Biomedical Microdevices 5:4, 281-290, 2003.

45. T. Geng, K. Kim, R. Gomez, D. Sherman, R. Bashir, M. R. Ladisch, and A. K. Bhunia, "Expression of Cellular Antigens of Listeria Monocytogenus that React with Monoclonal Antibodies C11E9 and EM-7G1 Under Acid, Salt, or Temperature Induced Stress Environments", Journal of Applied Microbiology, 95, pp762-772, 2003.

44. T. T. Huang, T. Geng, D. Akin, W. J. Chang, J. Sturgis, R. Bashir, A. K. Bhunia, J. P. Robinson, M. R. Ladsich, "Micro-assembly of functionalized particulate monolayer on C18 derivatized SiO2 surfaces", Biotechnol Bioeng. Volume 83, Issue 4, Date: 20 August 2003, Pages: 416-427.

43. S. W. Lee, R. Bashir, "Dielectrophoresis and Electro-hydrodynamics Mediated Fluidic Assembly of Silicon Resistors", Appl. Phys. Lett. 83, 3833 (2003) -(also in Virtual Journal of Nanoscale Science & Technology--November 10, 2003, Volume 8, Issue 19 ).

42. J. Zachary Hilt, Amit Gupta, Rashid Bashir, and Nicholas A. Peppas, "Ultra-sensitive biomems sensors based on Microcantilevers patterned with environmentally responsive hydrogels", Biomedical Microdevices, Volume 5, Issue 3. pp. 177-184, September 2003.

41. H. McNally, M. Pingle, S. W. Lee, D. Guo, D. Bergstrom, and R. Bashir, "Self-Assembly of Micro and Nano-Scale Particles using Bio-Inspired Events", Applied Surface Science, vol 214/1-4 pp 109 - 119, 2003.

40. A. Gupta, J. Denton, H. McNally, and R. Bashir, "Novel Fabrication Method for Surface Micro-Machined Thin Single-Crystal Silicon Cantilever Beams", IEEE/ASME Journal of Microelectromechanical Systems, Vl. 12, No. 2, April 2003, pp. 185-192.

39. T. Huang, J. Sturgis, R. Gomez, T. Geng, R. Bashir, A. K. Bhunia, J. P. Robinson, M. R. Ladisch, "Composite Surface for Blocking Bacterial Adsoprtion on Protein Biochips", Biotechnol Bioeng 81:618-624, 2003.

38. R. Bashir, "Biologically Mediated Assembly of Artificial Micro and Nanostructures" Chapter 15 in Goddard, Brenner, Iafrate, and Lyshevski (Eds.), CRC Handbook of Nanoscience, Engineering, and Technology, pp. 1-28, CRC Press, 2003.

2002


37. R. Bashir, J.Z. Hilt, A. Gupta, O. Elibol, and N.A. Peppas, "Micro-mechanical Cantilever as an Ultra-Sensitive pH Micro-sensor", Applied Physics Letters, Vol. 81, No. 16, pp 3091-3093, Oct 14th, 2002.

36. H. Chang, A. Ikram, T. Geng, F. Kosari, G. Vasmatzis, A. Bhunia, and R. Bashir, "Electrical characterization of microorganisms using microfabricated devices", J. Vac. Sci. Technol. B 20, 2058 (2002).

35. H. Li, R. Bashir, "Dielectrophoretic separation and manipulation of live and heat-treated cells of Listeria on microfabricated devices with interdigitated electrodes", Sensors and Actuators B, 86, 215-221, 2002.

34. R. Gomez, R. Bashir, A. K. Bhunia, "Microscale Electronic Detection of Bacterial Metabolism", Sensors and Actuators B, 86, 198-208, 2002.

33. S. W. Lee, H. A. McNally, D. Guo, M. Pingle, D. E. Bergstrom, and R. Bashir, "Electric-Field-Mediated Assembly of Silicon Islands Coated with Charged Molecules", Langmuir, 18, 3383-3386, 2002.

2001


32. R. Bashir, "DNA Nanobiostructures", Materials Today, Nov/Dec. 2001, pp. 30-39 (Invited Review).

31. R. Bashir, F. Hebert, J. DeSantis, J. M. McGregor, W. Yindeepol, K. Brown, R. Razouk, F. Moraveji, T. Mills, P. Hopper, J. Mcginty, L. Smith, and T. Krakowski, "A Complementary Bipolar Technology Family with a Vertically Integrated PNP for High Frequency Analog Applications", Special Issue on Bipolar Technology, IEEE Transactions on Electron Devices, vol. 48, no. 11, November 2001, pp. 2525-2534.

30. S. Bourland, J. Denton, A. Ikram, G. W. Neudeck, And R. Bashir, "SOI Processes For The Fabrication Of Novel Nano-Structures", Journal of Vacuum Science and Technology B, vol. 19, no. 5, Sept/Oct 2001, pp. 1995-1997.

29. H-M. Cheng, M. T. S. Ewe, R. Bashir, and G. C. T. Chiu, "Modeling and Control of Piezoelectric Cantilever Beam Micro-Mirror and Micro-Laser Arrays to Reduce Image Banding in Electrophotographic Processes", Journal of Micromechanics and Microengineering, 11, 2001, pp. 487-498.

28. R. Gomez, R. Bashir, T. Geng, A. Bhunia, M. Ladisch, H. Apple, S. Wereley, "Micro-Fluidic Bochip for Impedance Spectroscopy of Biological Species", Biomedical Micro-Devices, vol. 3, no. 3, September 14th, 2001, p. 201-209.

27. J. Ward, R. Bashir, and N. Peppes, "Micropatterning of Biomedical Polymer Surfaces by Novel UV Polymerization Techniques", Journal of Biomedical Materials Research, Volume 56, Issue: 3, 24th Apr 2001, Pages: 351-360.

26. R. Bashir, R. Gomez, A. Sarikaya, M. Ladisch, J. Sturgis, and J. P. Robinson, "Adsorption of Avidin on Micro-Fabricated Surfaces for Protein Biochip Applications", Biotechnology and Bioengineering, Volume 73, Issue 4, May 2001, pp. 324-328.

25. R. Bashir, K-J Chao, and A. E. Kabir, "Atomic Force Microscopy Study of Self-Assembled Si1-xGex Islands Produced by Controlled Relaxation of Strained Films", Journal of Vacuum Science and Technology-B, Vol. 19, No. 2, March/April 2001, pp. 517-522.

24. S. Lee and R. Bashir, "Modeling and Characterization of Deep Trench Isolation Structures", Microelectronics Journal, Vol. 32, No. 4, Jan 2001, pp. 295-300.

23. R. Bashir, "DNA-Mediated Artificial Nano-Bio-Structures: State of the Art and Future Directions", Superlattice and Microstructures, vol. 29, issue 1, p, January 2001, p. 1-16 (Invited Review).

2000


22. R. Bashir, A. Gupta, G. W. Neudeck, M. McElfresh, and R. Gomez, "On the Design of Piezoresistive Silicon Cantilevers with Stress Concentration Regions for Scanning Probe Microscopy Applications", Journal of Micromechanics and Microengineering, Volume 10, Number 4, December 2000, pp. 483-491.

21. R. Bashir and F. Hebert, "Stability of Boron And Phosphorus Implanted Tungsten Silicide Structures at HighTemperatures", Journal of Vacuum Science and Technology-B, Vol. 18, No. 4, July/Aug, 2000.

20. J. Babcock, P. Francis, R. Bashir, A. E. Kabir, T. Dhayahude, W. Yindeepol, S. J. Prasad, A. Kalnitsky, M. E. Thomas, H. Haggag, K. Egan, R. Razouk, and D. K. Schroder, "Precision Electrical Trimming of Poly-SiGe Resistors", IEEE Electron Device Letters, Vol. 21, No. 6, pp. 283-285, June 2000.

19. R. Bashir, T. Su, J. M. Sherman, G. W. Neudeck, J. Denton, and A. Obeidat "Reduction of Sidewall Defect Induced Leakage Currents by the Use of Nitrided Field Oxides in Silicon Selective Epitaxial Growth (SEG) Isolation for Advanced ULSI", Journal of Vacuum Science and Technology-B, Vol. 18, No. 2, March/April 2000.

18. R. Gomez, G. W. Neudeck, R. Bashir, "On the Design and Fabricaton of Novel Lateral Bipolar Transistor in a Deep-Submicron Technology", Microelectronics Journal, Vol. 31, No. 3, pp. 199-205, Feb 2000.

1999


17. A. E. Kabir, R. Bashir, J. Bernstein, J. De Santis, R. Mathews, J. O. O'Boyle, C. Bracken, "Very High Sensitivity Acoustic Transducers with Thin P+ Membrane and Gold Back Plate", Sensors and Actuators-A, Vol. 78, issue 2-3, pp.138-142, 17th Dec. 1999.

16. R. Bashir, A. E. Kabir, and K. Chao, "Formation of Self-Assembled Si1-xGex Islands Using Reduced Pressure Chemical Vapor Deposition and Subsequent Thermal Annealing of Thin Germanium Rich Films", Applied Surface Science, 152, pp. 99-106, 1999.

15. R. Bashir, A. E. Kabir, P. Westrom, D. Rossman, "Phosphorus and Arsenic Dopant Profile Control for High Performance Epitaxial Base Bipolar Junction Devices", Applied Physics Letters, Volume 75, Issue 6, pp. 796-798, August 9th , 1999.

1998


14. R. Bashir, F. Wang, W. Yindepool, J. De Santis, J. McGregor, "Back Gated Buried Oxide MOSFETs in a High Voltage Bipolar Technology for Bonded Oxide/SOI Interface Characterization", IEEE Electron Device Letter, Vol. 19, No. 8, pp. 282-284, August 1998.

13. R. Bashir, A. E. Kabir, F. Hebert, C. Bracken, "Tungsten Silicide and Tungsten Polycide Anisotropic Dry Etch Process for Highly Controlled Dimensions and Profiles", Journal of Vacuum Science and Technology-B, 16(4), pp. 2118-2120, Jul/Aug 1998.

12. M. Jamal Deen, S. Rumyantsev, R. Bashir, R. Taylor, "Measurements and Comparison of Low Frequency Noise in NPN and PNP Polysilicon Emitter Bipolar Junction Transistors", Journal of Applied Physics, Vol. 84, No.1, pp. 625-633, 1st July 1998.

1996


11. R. Bashir, F. Hebert, "PLATOP-A Novel Planarized Trench Isolation and Field Oxide Formation Using Poly-Silicon", IEEE Electron Device Letters, Vol.17, No. 7, pp. 352-354, July 1996.

10. J. M. Sherman, G. W. Neudeck, J. P. Denton, R. Bashir, W. W. Fultz, "Elimination of the Sidewall Defects in Selective Epitaxial Growth (SEG) of Silicon for a Dielectric Isolation Technology", IEEE Electron Device Letters, Vol.17, No. 6, pp. 267-269, June 1996.

1995


9. R. Bashir, S. Kim, N. Qadri, D. Jin, G. W. Neudeck, J. P. Denton, G. Yeric, K. Wu, A. Tasch, "Degradation of Insulators in the Silicon Selective Epitaxial Growth Ambient", IEEE Electron Device Letters, Vol. 16, no. 9, pp. 306-308, Sept. 1995.

8. R. Bashir, G. W. Neudeck, H. Yen, E. P. Kvam, "Characterization and Modeling of Sidewall Defects in Selective Epitaxial Growth of Silicon", Journal of Vacuum Science and Technology-B, Vol. 11, no. 5, p. 928-935, June/July 1995.

7. R. Bashir, G. W. Neudeck, H. Yen, E. P. Kvam, and J. P. Denton, "Characterization of Sidewall Defects in Selective Epitaxial Growth of Silicon", Journal of Vacuum Science and Technology-B, Vol. 11, no. 5, pp. 923-928, June/July 1995.

6. R. Bashir, W. McKweon, A. E. Kabir, "A Simple Process to Produce High Quality Silicon Surface Prior to Selective Epitaxial Growth ", IEEE Electron Device Letters, Vol. 13, no. 8, pp. 392-395, June 1995.

1993


5. H. Yen, E. P. Kvam, R. Bashir, G. W. Neudeck, "Microstructural Examination of Extended Crystal Defects in Silicon Selective Epitaxial Growth", Journal of Electronic Materials, Vol. 22, no. 11, pp. 1331-1339, 1993.

4. R. Bashir, S. Venkatesan, H. Yen, G. W. Neudeck, E. P. Kvam, "Doping of Poly-crystalline Silicon Films Using an Arsenic Spin-on-Dopant Source", Journal of Vaccum Science and Technology-B, Vol. 11, no. 5, pp. 1903-1905, Sept/Oct 1993.

1992


3. R. Bashir, S. Venkatesan, G. W. Neudeck, J. P. Denton, "A Poly-Silicon Contacted Sub-Collector BJT for a 3-Dimensional BiCMOS Process", IEEE Electron Device Letters, Vol. 13, no. 8, pp. 392-395, Aug 1992.

1990


2. R. Bashir, G. W. Neudeck, "A Technique to Measure the Dynamic Response of a-Si:H Circuits", Solid State Electronics, Vol. 33, no. 7, pp. 973-974, 1990.

1989


1. R. Bashir, C. Subramaniam, G. W. Neudeck, K. Y. Chung, "Delay Time Studies and Electron Mobility Measurement in an a-Si:H FET", IEEE Transaction on Electron Devices, Vol. 36, no. 12, pp. 2944-2948, Dec. 1989.